Human liver cell atlas - mesenchyme cells

Main

Cell Metadata

NRXN1+ Hepatic Stellate Cell

Ontology Term: hepatic stellate cellCL:0000632
Synonyms Terms that have the same, or nearly the same, meaning as the selected cell type.: Schwann cell
Category Class of which the cell type is a subclass.: extracellular matrix secreting cellCL:0000632
Ontology Assessment Disagreements with any aspect of the Cell Ontology.: —
Marker Gene Evidence Gene markers used by researcher to assign this cell annotation.: NRXN1, NRXN3, PLP1, CADM2
Canonical Marker Genes: NRXN1, NRXN3, PLP1, CADM2
Rationale: Annotated based on the listed marker genes.

Set of Labels Description: Author-provided cell type annotations (5 labels) for the liver mesenchyme dataset. QA description added during the RC1 Scenario 1 re-run.
Annotation Method: manual

Main

Cell Metadata

Ontology Term: hepatic stellate cellCL:0000632
Synonyms Terms that have the same, or nearly the same, meaning as the selected cell type.: Schwann cell
Category Class of which the cell type is a subclass.: extracellular matrix secreting cellCL:0000632
Ontology Assessment Disagreements with any aspect of the Cell Ontology.: —
Marker Gene Evidence Gene markers used by researcher to assign this cell annotation.: NRXN1, NRXN3, PLP1, CADM2
Canonical Marker Genes: NRXN1, NRXN3, PLP1, CADM2
Rationale: Annotated based on the listed marker genes.

Set of Labels Description: Author-provided cell type annotations (5 labels) for the liver mesenchyme dataset. QA description added during the RC1 Scenario 1 re-run.
Annotation Method: manual