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HMBA Consensus Basal Ganglia Atlas: Dopaminergic | CAP
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HMBA Consensus Basal Ganglia Atlas: Dopaminergic
HMBA Consensus Basal Ganglia Atlas: Dopaminergic
Main
Summary
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Cell Metadata
Neighborhood
Class
Subclass
Group
cluster_id
Summary
Dopaminergic
Metadata
Dataset Type
Single. The file includes a single dataset whereby “dataset” means a single library or a set of technical replicates that can be combined without having to worry about the associated batch effect.
Total Cells
8,775
tissue
brain
assay
10x multiome
disease
normal
organism
Macaca mulatta
(4,016 cells)
Homo sapiens
(2,655 cells)
Callithrix jacchus
(2,104 cells)
Cell Labels
Neighborhood
Description
Cell annotation set for Neighborhood
Annotation Method
manual
Cell Labels (1)
Cells (8,775)
Glut Sero Dopa
8,775
Class
Description
Cell annotation set for Class
Annotation Method
manual
Cell Labels (1)
Cells (8,775)
M Dopa
8,775
Subclass
Description
Cell annotation set for Subclass
Annotation Method
manual
Cell Labels (1)
Cells (8,775)
M Dopa
8,775
Group
Description
Cell annotation set for Group
Annotation Method
manual
Cell Labels (3)
Cells (8,775)
SN SOX6 Dopa
6,793
SN-VTR CALB1 Dopa
1,158
SN-VTR GAD2 Dopa
824
cluster_id
Description
Cell annotation set for cluster_id
Annotation Method
manual
Cell Labels (46)
Cells (8,775)
Human-122
1,950
Macaque-476
850
Macaque-484
849
Macaque-477
475
Macaque-475
393
Macaque-485
353
Macaque-486
319
Marmoset-1446
300
Marmoset-1456
237
Marmoset-1441
200
Macaque-478
196
Macaque-482
175
Molecular Data
preparing
Download Dataset
preparing
